CDS

Accession Number TCMCG007C04205
gbkey CDS
Protein Id XP_033138511.1
Location complement(join(20186087..20186206,20186294..20186368,20186445..20186600,20186674..20186751,20186828..20186928,20187017..20187164,20187245..20187389,20187477..20187580,20187660..20187788,20187892..20188002,20188086..20188215,20188309..20188428,20188613..20188734,20188959..20189042,20189383..20189499,20189769..20189849,20189952..20190011,20190174..20190216,20190589..20190687,20190780..20190979,20191055..20191083,20191117..20191209,20191404..20191539))
Gene LOC103847372
GeneID 103847372
Organism Brassica rapa

Protein

Length 826aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033282620.1
Definition 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic isoform X1 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category G
Description enzyme 2.2
KEGG_TC -
KEGG_Module M00565        [VIEW IN KEGG]
KEGG_Reaction R02110        [VIEW IN KEGG]
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K00700        [VIEW IN KEGG]
EC 2.4.1.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00500        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00500        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0001678        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003844        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009501        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009746        [VIEW IN EMBL-EBI]
GO:0009749        [VIEW IN EMBL-EBI]
GO:0009750        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010021        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016757        [VIEW IN EMBL-EBI]
GO:0016758        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0033500        [VIEW IN EMBL-EBI]
GO:0034284        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042593        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071322        [VIEW IN EMBL-EBI]
GO:0071324        [VIEW IN EMBL-EBI]
GO:0071326        [VIEW IN EMBL-EBI]
GO:0071329        [VIEW IN EMBL-EBI]
GO:0071331        [VIEW IN EMBL-EBI]
GO:0071332        [VIEW IN EMBL-EBI]
GO:0071333        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:2000896        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTGGTGGTTCATGGAGTGTCTCTGACTCCAGGTGTTCTCGTCTCATCCTTCCTCCCTCTTCCCCTCTCTTCTTCCAATGCGCGATCTCTCAACTCCACCGTCTCTTTCTTCCTGAAGAAACGCCCTCTCTCTCGGAAGATCTTCGCTGGGAATCAATCTGCTAAGTTTGATTCCAAGTCGCAAGCCGTCTCGAAGAAAGTCTTAGTACCTGATAATGTTGATGATGGTCCCAGCAGCGTTTCAGAAGAATCACAGATATTAAATCTAGAGAGTCAAACAATGGAAGAGGATGGGATAGTGATAACCGAGGACCAAGCGTCTGTTTCTGTTAATTCGAGTAAAGTCGTCAAGGAGAAAGAGGTGAAGCCAAGAACGGTTCCTCCACCTGGTAATGGGCAGATAATATATGAGATAGACCCCATGTTGCGGAGTTACAAAGACCATCTTGACTACCGCTATAAACAGTATAAAAGATTGCGCGAGGAAATAGACAAGTATGAGGGTGGTCTGGAGGCATTCTCTCGTGGATATGAAAAGTTAGGATTCTTGCGCAGTGATGCCGGTATAACTTATAGAGAGTGGGCGCCTGGAGCTAAGTCTGCATCACTAATTGGAGATTTCAACAACTGGAATCCTAATGCAGATATCATGACTCGTAATGAATTTGGTGTTTGGGAGATCTTCTTGCCCAACAACACGGATGGTTCGCCAGCAATCCCCCATGGCTCACGTGTAAAGATTCGTATGGATACACCATCTGGCATTAAAGACTCAATTCCTGCTTGGATCAAGTTCTCGGTGCAAGCTCCAGGTGAAATCCCGTTCAATGGCATATACTATGATCCTCCAGAAGAGGAGAAGTATGTATTCAAACATCCCCAACCAAAGAGACCTAAGTCGCTGAGGATTTATGAGTCACATGTTGGCATGAGTAGCACGGAACCGATGATCAATACTTATGCTAATTTTAGAGATGATGTGCTTCCACGTATCAAAAAGCTTGGCTACAATGCTGTTCAAATCATGGCTATACAAGAACATTCATATTATGCCAGCTTTGGGTACCATGTCACAAACTTTTTTGCCCCTAGCAGCCGTTGTGGAACCCCAGAGGACCTAAAATCACTGATAGATAGAGCTCATGAGTTAGGCCTGATCGTTCTGATGGATATCGTTCACAGCCATGCTTCAAAAAATACATTGGATGGACTGAACATGTTTGATGGAACTGATGCTCACTACTTCCACTCTGGACCTCGGGGTTACCATTGGATGTGGGACTCGCGTCTTTTCAATTATGGGAGCTGGGAAGTGCTACGGTATCTTCTTTCAAATGCTCGGTGGTGGCTAGAAGAATACAAGTTTGATGGATTTAGATTTGATGGTGTTACCTCAATGATGTATACTCATCATGGACTCTCGGTTGGATTTACTGGAAATTACACTGAGTACTTTGGGTTGGAAACTGATGTGGACGCTGTGACTTATCTGATGCTGGTAAATGATATGATTCATGGGCTCTACCCTGAAGCGGTTACCGTTGGTGAAGATGTTAGTGGTATGCCAACATTCTGCATCCCTGTCCAAGATGGTGGCGTTGGATTTGACTACCGTTTACACATGGCCATAGCTGATAAATGGATAGAAATTCTCAAGAAGCGAGATGAGGACTGGAAAATGGGCGACATCATTTACACGCTTACCAACCGAAGGTGGTCAGAGAAGTGTATTGCCTATGCTGAGAGTCACGATCAAGCTCTTGTTGGTGATAAAACAATTGCCTTCTGGTTAATGGACAAGGATATGTATGATTTCATGGCAGTAGACAGACCATCAACTCCTCTTGTTGATAGAGGAATAGCTTTGCATAAAATGATTAGGCTTATAACCATGGGATTAGGCGGTGAAGGCTACTTAAATTTTATGGGGAACGAGTTCGGACATCCAGAATGGATCGATTTTCCCAGAGGCGAGCAGCGTCTTTCTGATGGGAGTGTGATTCCTGGGAACAACTTCAGTTATGACAAATGCAGGCGCAGATTTGATCTTGGGGATGCGGACTATCTTAGATACCATGGACTGCAAGAGTTTGATCGGGCAATGCAACATCTTGAAGAGAAATACGGTTTTATGACTTCAGAGCATCAATTCATATCAAGAAAAGACGAAGGAGACAGAGTAATCGTGTTCGAAAGGGGTGATCTGGTCTTCGTCTTCAACTTCCACTGGACCAGCAGCTACTTTGATTACCGCATTGGTTGCTCCAAGCCAGGCAAATACAAGATCGTATTGGACTCGGACGATCCTCTGTTTGGTGGATTCGGTAGGCTCGACCGCACGGCAGAGTATTTCACATTTGAGGGCTCATTCGACGGACGACCCTCCTCGTTCATGGTCTACACACCATGTAGAACTGCCGTGGTTTACGCTTTAGCAGACCGTGATGATGATCTCGAGACTTTGGGTTCAAAACCGTAA
Protein:  
MVVVHGVSLTPGVLVSSFLPLPLSSSNARSLNSTVSFFLKKRPLSRKIFAGNQSAKFDSKSQAVSKKVLVPDNVDDGPSSVSEESQILNLESQTMEEDGIVITEDQASVSVNSSKVVKEKEVKPRTVPPPGNGQIIYEIDPMLRSYKDHLDYRYKQYKRLREEIDKYEGGLEAFSRGYEKLGFLRSDAGITYREWAPGAKSASLIGDFNNWNPNADIMTRNEFGVWEIFLPNNTDGSPAIPHGSRVKIRMDTPSGIKDSIPAWIKFSVQAPGEIPFNGIYYDPPEEEKYVFKHPQPKRPKSLRIYESHVGMSSTEPMINTYANFRDDVLPRIKKLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRCGTPEDLKSLIDRAHELGLIVLMDIVHSHASKNTLDGLNMFDGTDAHYFHSGPRGYHWMWDSRLFNYGSWEVLRYLLSNARWWLEEYKFDGFRFDGVTSMMYTHHGLSVGFTGNYTEYFGLETDVDAVTYLMLVNDMIHGLYPEAVTVGEDVSGMPTFCIPVQDGGVGFDYRLHMAIADKWIEILKKRDEDWKMGDIIYTLTNRRWSEKCIAYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRPSTPLVDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPEWIDFPRGEQRLSDGSVIPGNNFSYDKCRRRFDLGDADYLRYHGLQEFDRAMQHLEEKYGFMTSEHQFISRKDEGDRVIVFERGDLVFVFNFHWTSSYFDYRIGCSKPGKYKIVLDSDDPLFGGFGRLDRTAEYFTFEGSFDGRPSSFMVYTPCRTAVVYALADRDDDLETLGSKP